BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B11LP1|AL425991
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1442 1616 0.0
>3x_Contig1442
Length = 8270
Score = 1616 bits (815), Expect = 0.0
Identities = 815/815 (100%)
Strand = Plus / Minus
Query: 1 gatcaattgagctataactctttcaccactatgaagaaaaatcacataaaaaaaccgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 gatcaattgagctataactctttcaccactatgaagaaaaatcacataaaaaaaccgtga 5160
Query: 61 acctgaacaggaactttcaaaagtgcgttcttagtgaaaagaaaaaaacaccaaatgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 acctgaacaggaactttcaaaagtgcgttcttagtgaaaagaaaaaaacaccaaatgtat 5100
Query: 121 cttcactggctcctgaacaacaccttatatttcaaaacaataaagtcatctcatgaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 cttcactggctcctgaacaacaccttatatttcaaaacaataaagtcatctcatgaccat 5040
Query: 181 ctattcgtaaaccaactgctcttctcttacttttacgtatgttgagcctttccgatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5039 ctattcgtaaaccaactgctcttctcttacttttacgtatgttgagcctttccgatttct 4980
Query: 241 caacatcccaacaaattcgcaaaaaccatgcgatgctgaagagggaaatggtgttacccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4979 caacatcccaacaaattcgcaaaaaccatgcgatgctgaagagggaaatggtgttacccg 4920
Query: 301 accattacgttatcatgagtagacacgtgaccgtaaagatctttaggtgtcctcgctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4919 accattacgttatcatgagtagacacgtgaccgtaaagatctttaggtgtcctcgctaag 4860
Query: 361 gtgatgatcggtatcacctggtgttcggtaccgctcagtggttgtatttggtgttgggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4859 gtgatgatcggtatcacctggtgttcggtaccgctcagtggttgtatttggtgttgggat 4800
Query: 421 gatcgtatctccaaagcctgttgtggaaggagtagttggagggattgttgtagcttctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 gatcgtatctccaaagcctgttgtggaaggagtagttggagggattgttgtagcttctgt 4740
Query: 481 tgggttttgttgttgcggttgatgatgatggtggtgatgatgggtattctgatgttctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4739 tgggttttgttgttgcggttgatgatgatggtggtgatgatgggtattctgatgttctgg 4680
Query: 541 atccgtgtctgattcagaagcgtctctggtaggcgtttgaactcctgtactatttccagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4679 atccgtgtctgattcagaagcgtctctggtaggcgtttgaactcctgtactatttccagt 4620
Query: 601 ggtgtttgttgagtttgattcttgacaccagtacctatgaaattcccatgatttcagttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4619 ggtgtttgttgagtttgattcttgacaccagtacctatgaaattcccatgatttcagttg 4560
Query: 661 gcacagtcttgagcaatatttggtgcgcttacaccttctacatttggggaactgttttgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4559 gcacagtcttgagcaatatttggtgcgcttacaccttctacatttggggaactgttttgg 4500
Query: 721 atgatcttcccatttcccacagctgaaattagcacactgcctgactcctgtagcctcatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4499 atgatcttcccatttcccacagctgaaattagcacactgcctgactcctgtagcctcatg 4440
Query: 781 tttcctgcacgagtttctcattaccacggagctcc 815
|||||||||||||||||||||||||||||||||||
Sbjct: 4439 tttcctgcacgagtttctcattaccacggagctcc 4405
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6522
Number of Sequences: 1807
Number of extensions: 6522
Number of successful extensions: 107
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)